Armanini, Federica
Armanini, Federica
CIBIO (29/10/12-)
Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations
2020-01-01 Karcher, Nicolai; Pasolli, Edoardo; Asnicar, Francesco; Huang, Kun D.; Tett, Adrian; Manara, Serena; Armanini, Federica; Bain, Debbie; Duncan, Sylvia H.; Louis, Petra; Zolfo, Moreno; Manghi, Paolo; Valles-Colomer, Mireia; Raffaetà, Roberta; Rota-Stabelli, Omar; Collado, Maria Carmen; Zeller, Georg; Falush, Daniel; Maixner, Frank; Walker, Alan W.; Huttenhower, Curtis; Segata, Nicola
Commensal Bifidobacterium Strains Enhance the Efficacy of Neo-Epitope Based Cancer Vaccines
2021-01-01 Tomasi, Michele; Dalsass, Mattia; Beghini, Francesco; Zanella, Ilaria; Caproni, Elena; Fantappiè, Laura; Gagliardi, Assunta; Irene, Carmela; König, Enrico; Frattini, Luca; Masetti, Giulia; Isaac, Samine Jessica; Armanini, Federica; Cumbo, Fabio; Blanco-Míguez, Aitor; Grandi, Alberto; Segata, Nicola; Grandi, Guido
Cross-cohort gut microbiome associations with immune checkpoint inhibitor response in advanced melanoma
2022-01-01 Lee, Karla A; Thomas, Andrew Maltez; Bolte, Laura A; Björk, Johannes R; de Ruijter, Laura Kist; Armanini, Federica; Asnicar, Francesco; Blanco-Miguez, Aitor; Board, Ruth; Calbet-Llopart, Neus; Derosa, Lisa; Dhomen, Nathalie; Brooks, Kelly; Harland, Mark; Harries, Mark; Leeming, Emily R; Lorigan, Paul; Manghi, Paolo; Marais, Richard; Newton-Bishop, Julia; Nezi, Luigi; Pinto, Federica; Potrony, Miriam; Puig, Susana; Serra-Bellver, Patricio; Shaw, Heather M; Tamburini, Sabrina; Valpione, Sara; Vijay, Amrita; Waldron, Levi; Zitvogel, Laurence; Zolfo, Moreno; de Vries, Elisabeth G E; Nathan, Paul; Fehrmann, Rudolf S N; Bataille, Véronique; Hospers, Geke A P; Spector, Tim D; Weersma, Rinse K; Segata, Nicola
Draft genome sequence of the planktic cyanobacterium Tychonema bourrellyi, isolated from Alpine lentic freshwater
2017-01-01 Pinto, Federica; Tett, Adrian; Armanini, Federica; Asnicar, Francesco; Boscaini, Adriano; Pasolli, Edoardo; Zolfo, Moreno; Donati, Claudio; Salmaso, Nico; Segata, Nicola
Draft genome sequences of novel Pseudomonas, Flavobacterium, and Sediminibacterium species strains from a freshwater ecosystem
2018-01-01 Pinto, Federica; Tett, Adrian; Armanini, Federica; Asnicar, Francesco; Boscaini, Adriano; Pasolli, Edoardo; Zolfo, Moreno; Donati, Claudio; Salmaso, Nico; Segata, Nicola
Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle
2019-01-01 Pasolli, Edoardo; Asnicar, Francesco; Manara, Serena; Zolfo, Moreno; Karcher, Nicolai; Armanini, Federica; Beghini, Francesco; Manghi, Paolo; Tett, Adrian; Ghensi, Paolo; Collado, Maria Carmen; Rice, Benjamin L.; Dulong, Casey; Morgan, Xochitl C.; Golden, Christopher D.; Quince, Christopher; Huttenhower, Curtis; Segata, Nicola
Faecal microbiota transplantation for the treatment of diarrhoea induced by tyrosine-kinase inhibitors in patients with metastatic renal cell carcinoma
2020-01-01 Ianiro, Gianluca; Rossi, Ernesto; Thomas, Andrew M.; Schinzari, Giovanni; Masucci, Luca; Quaranta, Gianluca; Settanni, Carlo Romano; Lopetuso, Loris Riccardo; Armanini, Federica; Blanco-Miguez, Aitor; Asnicar, Francesco; Consolandi, Clarissa; Iacovelli, Roberto; Sanguinetti, Maurizio; Tortora, Giampaolo; Gasbarrini, Antonio; Segata, Nicola; Cammarota, Giovanni
How inoculation affects the development and the performances of microalgal-bacterial consortia treating real municipal wastewater
2020-01-01 Petrini, S.; Foladori, P.; Beghini, F.; Armanini, F.; Segata, N.; Andreottola, G.
Immune system and intestinal microbiota determine efficacy of androgen deprivation therapy against prostate cancer
2022-01-01 Terrisse, Safae; Goubet, Anne-Gaelle; Ueda, Kousuke; Thomas, Andrew Maltez; Quiniou, Valentin; Thelemaque, Cassandra; Dunsmore, Garett; Clave, Emmanuel; Gamat-Huber, Melissa; Yonekura, Satoru; Ferrere, Gladys; Rauber, Conrad; Pham, Hang Phuong; Fahrner, Jean-Eudes; Pizzato, Eugenie; Ly, Pierre; Fidelle, Marine; Mazzenga, Marine; Costa Silva, Carolina Alves; Armanini, Federica; Pinto, Federica; Asnicar, Francesco; Daillère, Romain; Derosa, Lisa; Richard, Corentin; Blanchard, Pierre; Routy, Bertrand; Culine, Stéphane; Opolon, Paule; Silvin, Aymeric; Ginhoux, Florent; Toubert, Antoine; Segata, Nicola; Mcneel, Douglas G; Fizazi, Karim; Kroemer, Guido; Zitvogel, Laurence
Maternal inheritance of bifidobacterial communities and bifidophages in infants through vertical transmission
2017-01-01 Duranti, Sabrina; Lugli, Gabriele Andrea; Mancabelli, Leonardo; Armanini, Federica; Turroni, Francesca; James, Kieran; Ferretti, Pamela; Gorfer, Valentina; Ferrario, Chiara; Milani, Christian; Mangifesta, Marta; Anzalone, Rosaria; Zolfo, Moreno; Viappiani, Alice; Pasolli, Edoardo; Bariletti, Ilaria; Canto, Rosarita; Clementi, Rosanna; Cologna, Marina; Crifò, Tiziana; Cusumano, Giuseppina; Fedi, Sabina; Gottardi, Stefania; Innamorati, Claudia; Masè, Caterina; Postai, Daniela; Savoi, Daniela; Soffiati, Massimo; Tateo, Saverio; Pedrotti, Anna; Segata, Nicola; van Sinderen, Douwe; Ventura, Marco
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation
2019-01-01 Thomas, Andrew Maltez; Manghi, Paolo; Asnicar, Francesco; Pasolli, Edoardo; Armanini, Federica; Zolfo, Moreno; Beghini, Francesco; Manara, Serena; Karcher, Nicolai; Pozzi, Chiara; Gandini, Sara; Serrano, Davide; Tarallo, Sonia; Francavilla, Antonio; Gallo, Gaetano; Trompetto, Mario; Ferrero, Giulio; Mizutani, Sayaka; Shiroma, Hirotsugu; Shiba, Satoshi; Shibata, Tatsuhiro; Yachida, Shinichi; Yamada, Takuji; Wirbel, Jakob; Schrotz-King, Petra; Ulrich, Cornelia M.; Brenner, Hermann; Arumugam, Manimozhiyan; Bork, Peer; Zeller, Georg; Cordero, Francesca; Dias-Neto, Emmanuel; Setubal, João Carlos; Tett, Adrian; Pardini, Barbara; Rescigno, Maria; Waldron, Levi; Naccarati, Alessio; Segata, Nicola
Methicillin-resistant Staphylococcus aureus eradication in cystic fibrosis patients: A randomized multicenter study
2019-01-01 Dolce, D.; Neri, S.; Grisotto, L.; Campana, S.; Ravenni, N.; Miselli, F.; Camera, E.; Zavataro, L.; Braggion, C.; Fiscarelli, E. V.; Lucidi, V.; Cariani, L.; Girelli, D.; Faelli, N.; Colombo, C.; Lucanto, C.; Lombardo, M.; Magazzu, G.; Tosco, A.; Raia, V.; Manara, S.; Pasolli, E.; Armanini, F.; Segata, N.; Biggeri, A.; Taccetti, G.
Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome
2018-01-01 Ferretti, Pamela; Pasolli, Edoardo; Tett, Adrian; Asnicar, Francesco; Gorfer, Valentina; Fedi, Sabina; Armanini, Federica; Truong, Duy Tin; Manara, Serena; Zolfo, Moreno; Beghini, Francesco; Bertorelli, Roberto; De Sanctis, Veronica; Bariletti, Ilaria; Canto, Rosarita; Clementi, Rosanna; Cologna, Marina; Crifò, Tiziana; Cusumano, Giuseppina; Gottardi, Stefania; Innamorati, Claudia; Masè, Caterina; Postai, Daniela; Savoi, Daniela; Duranti, Sabrina; Lugli, Gabriele Andrea; Mancabelli, Leonardo; Turroni, Francesca; Ferrario, Chiara; Milani, Christian; Mangifesta, Marta; Anzalone, Rosaria; Viappiani, Alice; Yassour, Moran; Vlamakis, Hera; Xavier, Ramnik; Collado, Carmen Maria; Koren, Omry; Tateo, Saverio; Soffiati, Massimo; Pedrotti, Anna; Ventura, Marco; Huttenhower, Curtis; Bork, Peer; Segata, Nicola
Nutrient removal and microbial community analysis of a stable microalgal-bacterial consortium treating real municipal wastewater
2019-01-01 Petrini, S.; Foladori, P.; Armanini, F.; Segata, N.; Andreottola, G.
Strong oral plaque microbiome signatures for dental implant diseases identified by strain-resolution metagenomics
2020-01-01 Ghensi, Paolo; Manghi, Paolo; Zolfo, Moreno; Armanini, Federica; Pasolli, Edoardo; Bolzan, Mattia; Bertelle, Alberto; Dell’Acqua, Federico; Dellasega, Ester; Waldner, Romina; Tessarolo, Francesco; Tomasi, Cristiano; Segata, Nicola
Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling
2017-01-01 Asnicar, Francesco; Manara, Serena; Zolfo, Moreno; Truong, Duy Tin; Scholz, Matthias Uwe; Armanini, Federica; Ferretti, Pamela; Gorfer, Valentina; Pedrotti, Anna; Tett, Adrian James; Segata, Nicola
The person-to-person transmission landscape of the gut and oral microbiomes
2023-01-01 Valles-Colomer, Mireia; Blanco-Míguez, Aitor; Manghi, Paolo; Asnicar, Francesco; Dubois, Leonard; Golzato, Davide; Armanini, Federica; Cumbo, Fabio; Huang, Kun D; Manara, Serena; Masetti, Giulia; Pinto, Federica; Piperni, Elisa; Punčochář, Michal; Ricci, Liviana; Zolfo, Moreno; Farrant, Olivia; Goncalves, Adriana; Selma-Royo, Marta; Binetti, Ana G; Becerra, Jimmy E; Han, Bei; Lusingu, John; Amuasi, John; Amoroso, Loredana; Visconti, Alessia; Steves, Claire M; Falchi, Mario; Filosi, Michele; Tett, Adrian; Last, Anna; Xu, Qian; Qin, Nan; Qin, Huanlong; May, Jürgen; Eibach, Daniel; Corrias, Maria Valeria; Ponzoni, Mirco; Pasolli, Edoardo; Spector, Tim D; Domenici, Enrico; Collado, Maria Carmen; Segata, Nicola
The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations
2019-01-01 Tett, Adrian; Huang, Kun D.; Asnicar, Francesco; Fehlner-Peach, Hannah; Pasolli, Edoardo; Karcher, Nicolai; Armanini, Federica; Manghi, Paolo; Bonham, Kevin; Zolfo, Moreno; De Filippis, Francesca; Magnabosco, Cara; Bonneau, Richard; Lusingu, John; Amuasi, John; Reinhard, Karl; Rattei, Thomas; Boulund, Fredrik; Engstrand, Lars; Zink, Albert; Collado, Maria Carmen; Littman, Dan R.; Eibach, Daniel; Ercolini, Danilo; Rota-Stabelli, Omar; Huttenhower, Curtis; Maixner, Frank; Segata, Nicola
Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis
2017-01-01 Tett, Adrian James; Pasolli, Edoardo; Farina, Stefania; Truong, Duy Tin; Asnicar, Francesco; Zolfo, Moreno; Beghini, Francesco; Armanini, Federica; Jousson, Olivier; De Sanctis, Veronica; Bertorelli, Roberto; Girolomoni, Giampiero; Cristofolini, Mario; Segata, Nicola
Untargeted Metagenomic Investigation of the Airway Microbiome of Cystic Fibrosis Patients with Moderate-Severe Lung Disease
2020-01-01 Bacci, Giovanni; Taccetti, Giovanni; Dolce, Daniela; Armanini, Federica; Segata, Nicola; Di Cesare, Francesca; Lucidi, Vincenzina; Fiscarelli, Ersilia; Morelli, Patrizia; Casciaro, Rosaria; Negroni, Anna; Mengoni, Alessio; Bevivino, Annamaria