Truong, Duy Tin
Truong, Duy Tin
A Cluster-Oriented Genetic Algorithm for Alternative Clustering
2012-01-01 Truong, Duy Tin; Battiti, Roberto
A Repeated Local Search Algorithm for Biclustering of Gene Expression Data
2013-01-01 Truong, Duy Tin; Battiti, Roberto; Brunato, Mauro
A Survey of Semi-Supervised Clustering Algorithms: from a priori scheme to interactive scheme and open issues
2013-01-01 Battiti, Roberto; Truong, Duy Tin
Accessible, curated metagenomic data through ExperimentHub
2017-01-01 Pasolli, Edoardo; Schiffer, Lucas Michael; Manghi, Paolo; Renson, Audrey; Obenchain, Valerie; Truong, Duy Tin; Beghini, Francesco; Malik, Faizan; Ramos, Marcel; Dowd, Jennifer B; Huttenhower, Curtis; Morgan, Martin; Segata, Nicola; Waldron, Levi
Automated Parameter Configuration for an SMT Solver
2010-01-01 Truong, Duy Tin
Discovering Non-redundant Overlapping Biclusters on Gene Expression Data
2013-01-01 Truong, Duy Tin; Battiti, Roberto; Brunato, Mauro
Machine Learning Meta-analysis of Large Metagenomic Datasets: Tools and Biological Insights
2016-01-01 Pasolli, Edoardo; Truong, Duy Tin; Malik, Faizan; Waldron, Levi; Segata, Nicola
MetaPhlAn2 for enhanced metagenomic taxonomic profiling
2015-01-01 Truong, Duy Tin; Franzosa, Eric A; Tickle, Timothy L; Scholz, Matthias Uwe; Weingart, George; Pasolli, Edoardo; Tett, Adrian James; Huttenhower, Curtis; Segata, Nicola
Microbial strain-level population structure and genetic diversity from metagenomes
2017-01-01 Truong, Duy Tin; Tett, Adrian James; Pasolli, Edoardo; Huttenhower, Curtis; Segata, Nicola
Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome
2018-01-01 Ferretti, Pamela; Pasolli, Edoardo; Tett, Adrian; Asnicar, Francesco; Gorfer, Valentina; Fedi, Sabina; Armanini, Federica; Truong, Duy Tin; Manara, Serena; Zolfo, Moreno; Beghini, Francesco; Bertorelli, Roberto; De Sanctis, Veronica; Bariletti, Ilaria; Canto, Rosarita; Clementi, Rosanna; Cologna, Marina; Crifò, Tiziana; Cusumano, Giuseppina; Gottardi, Stefania; Innamorati, Claudia; Masè, Caterina; Postai, Daniela; Savoi, Daniela; Duranti, Sabrina; Lugli, Gabriele Andrea; Mancabelli, Leonardo; Turroni, Francesca; Ferrario, Chiara; Milani, Christian; Mangifesta, Marta; Anzalone, Rosaria; Viappiani, Alice; Yassour, Moran; Vlamakis, Hera; Xavier, Ramnik; Collado, Carmen Maria; Koren, Omry; Tateo, Saverio; Soffiati, Massimo; Pedrotti, Anna; Ventura, Marco; Huttenhower, Curtis; Bork, Peer; Segata, Nicola
Non-Redundant Overlapping Clustering: Algorithms and Applications
2013-01-01 Truong, Duy Tin
Pareto Local Search for Alternative Clustering
2013-01-01 Truong, Duy Tin; Battiti, Roberto
Strain-level microbial epidemiology and population genomics from shotgun metagenomics
2016-01-01 Scholz, Matthias Uwe; Ward, Doyle V.; Pasolli, Edoardo; Tolio, Thomas; Zolfo, Moreno; Asnicar, Francesco; Truong, Duy Tin; Tett, Adrian James; Morrow, Ardythe L.; Segata, Nicola
Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling
2017-01-01 Asnicar, Francesco; Manara, Serena; Zolfo, Moreno; Truong, Duy Tin; Scholz, Matthias Uwe; Armanini, Federica; Ferretti, Pamela; Gorfer, Valentina; Pedrotti, Anna; Tett, Adrian James; Segata, Nicola
The reproductive tracts of two malaria vectors are populated by a core microbiome and by gender-and swarm-enriched microbial biomarkers
2016-01-01 Segata, Nicola; Baldini, Francesco; Pompon, Julien; Garrett, Wendy S.; Truong, Duy Tin; Dabiré, Roch K.; Diabaté, Abdoulaye; Levashina, Elena A.; Catteruccia, Flaminia
Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis
2017-01-01 Tett, Adrian James; Pasolli, Edoardo; Farina, Stefania; Truong, Duy Tin; Asnicar, Francesco; Zolfo, Moreno; Beghini, Francesco; Armanini, Federica; Jousson, Olivier; De Sanctis, Veronica; Bertorelli, Roberto; Girolomoni, Giampiero; Cristofolini, Mario; Segata, Nicola