Romanel, Alessandro
Romanel, Alessandro
CIBIO (29/10/12-)
A Formal and Integrated Framework to Simulate Evolution of Biological Pathways
2007-01-01 Dematte', Lorenzo; Priami, Corrado; Soyer, Orkun; Romanel, Alessandro
A Formal and Integrated Framework to Simulate Evolution of Biological Pathways
2007-01-01 Demattè, Lorenzo; Priami, Corrado; Romanel, Alessandro; O., Soyer
A highly specific SpCas9 variant is identified by in vivo screening in yeast
2018-01-01 Casini, Antonio; Olivieri, Michele; Petris, Gianluca; Montagna, Claudia; Reginato, Giordano; Maule, Giulia; Lorenzin, Francesca; Prandi, Davide; Romanel, Alessandro; Demichelis, Francesca; Inga, Alberto; Cereseto, Anna
A Phase II Trial of the Aurora Kinase A Inhibitor Alisertib for Patients with Castration-resistant and Neuroendocrine Prostate Cancer: Efficacy and Biomarkers
2019-01-01 Beltran, H.; Oromendia, C.; Danila, D. C.; Montgomery, B.; Hoimes, C.; Szmulewitz, R. Z.; Vaishampayan, U.; Armstrong, A. J.; Stein, M.; Pinski, J.; Mosquera, J. M.; Sailer, V.; Bareja, R.; Romanel, A.; Gumpeni, N.; Sboner, A.; Dardenne, E.; Puca, L.; Prandi, D.; Rubin, M. A.; Scher, H. I.; Rickman, D. S.; Demichelis, F.; Nanus, D. M.; Ballman, K. V.; Tagawa, S. T.
A slow-cycling/quiescent cells subpopulation is involved in glioma invasiveness
2022-01-01 Antonica, Francesco; Santomaso, Lucia; Pernici, Davide; Petrucci, Linda; Aiello, Giuseppe; Cutarelli, Alessandro; Conti, Luciano; Romanel, Alessandro; Miele, Evelina; Tebaldi, Toma; Tiberi, Luca
ABEMUS: platform-specific and data-informed detection of somatic SNVs in cfDNA
2020-01-01 Casiraghi, Nicola; Orlando, Francesco; Ciani, Yari; Xiang, Jenny; Sboner, Andrea; Elemento, Olivier; Attard, Gerhardt; Beltran, Himisha; Demichelis, Francesca; Romanel, Alessandro
Allele-informed copy number evaluation of plasma DNA samples from metastatic prostate cancer patients: the PCF_SELECT consortium assay
2022-01-01 Orlando, Francesco; Romanel, Alessandro; Trujillo, Blanca; Sigouros, Michael; Wetterskog, Daniel; Quaini, Orsetta; Leone, Gianmarco; Xiang, Jenny Z; Wingate, Anna; Tagawa, Scott; Jayaram, Anuradha; Linch, Mark; Swanton, Charles; Jamal-Hanjani, Mariam; Abbosh, Chris; Zaccaria, Simone; Hessey, Sonya; Shiu, Kai-Keen; Bridgewater, John; Hochhauser, Daniel; Forster, Martin; Lee, Siow-Ming; Ahmad, Tanya; Papadatos-Pastos, Dionysis; Janes, Sam; Van Loo, Peter; Enfield, Katey; Mcgranahan, Nicholas; Huebner, Ariana; Quezada, Sergio; Beck, Stephan; Parker, Peter; Enver, Tariq; Hynds, Robert E; Dijkstra, Krijn; Pearce, David R; Falzon, Mary; Proctor, Ian; Sinclair, Ron; Lok, Chi-wah; Rhodes, Zoe; Moore, David; Marafioti, Teresa; Mitchison, Miriam; Ellery, Peter; Sivakumar, Monica; Linch, Mark; Brandner, Sebastian; Rowan, Andrew; Hiley, Crispin; Veeriah, Selvaraju; Shaw, Heather; Attard, Gert; Naceur-Lombardelli, Cristina; Toncheva, Antonia; Prymas, Paulina; Watkins, Tom; Bailey, Chris; Martinez Ruiz, Carlos; Litchfield, Kevin; Al-Bakir, Maise; Kanu, Nnenna; Ward, Sophie; Lim, Emilia; Reading, James; Chain, Benny; Alba, Blanca Trujillo; Watkins, Tom; Akay, Melek; Flanagan, Adrienne; Biswas, Dhruva; Pich, Oriol; Dietzen, Michelle; Puttick, Clare; Colliver, Emma; Magness, Alistair; Angelova, Mihaela; Black, James; Lucas, Olivia; Hill, William; Liu, Wing-Kin; Frankell, Alexander; Magno, Neil; Athanasopoulou, Foteini; Wilson, Gareth; Rosenthal, Rachel; Salgado, Roberto; Lee, Claudia; Grigoriadis, Kristiana; Al-Sawaf, Othman; Karasaki, Takahiro; Bunkum, Abigail; Noorani, Imran; Benafif, Sarah; Barbe, Vittorio; Bola, Supreet; Vainauskas, Osvaldas; Wingate, Anna; Wetterskog, Daniel; Hasan, Mahedi; Lise, Stefano; Leone, Gianmarco; Jayaram, Anuradha; Alifrangis, Constantine; Mcgovern, Ursula; Thol, Kerstin; Gamble, Samuel; Ung, Seng Kuong; Sahwangarrom, Teerapon; Marin, Claudia Peinador; Wong, Sophia; Pawlik, Piotr; Gishen, Faye; Tookman, Adrian; Stone, Paddy; Stirling, Caroline; Turajlic, Samra; Larkin, James; Pickering, Lisa; Furness, Andrew; Young, Kate; Drake, Will; Edmonds, Kim; Hunter, Nikki; Mangwende, Mary; Pearce, Karla; Grostate, Lauren; Au, Lewis; Spain, Lavinia; Shepherd, Scott; Yan, Haixi; Shum, Ben; Tippu, Zayd; Hanley, Brian; Spencer, Charlotte; Emmerich, Max; Gerard, Camille; Schmitt, Andreas Michael; Del Rosario, Lyra; Carlyle, Eleanor; Lewis, Charlotte; Holt, Lucy; Lucanas, Analyn; O'Flaherty, Molly; Hazell, Steve; Mudhar, Hardeep; Messiou, Christina; Latifoltojar, Arash; Fendler, Annika; Byrne, Fiona; Pallinkonda, Husayn; Lobon, Irene; Coulton, Alex; Cattin, Anne Laure; Deng, Daqi; Feng, Geoffrey Hugang; Rowan, Andew; Yousaf, Nadia; Popat, Sanjay; Curtis, Olivia; Milner-Watts, Charlotte; Stamp, Gordon; Toncheva, Antonia; Nye, Emma; Murra, Aida; Korteweg, Justine; Kelly, Denise; Terry, Lauren; Biano, Jennifer; Peat, Kema; Kelly, Kayleigh; Hill, Peter; Josephs, Debra; Irshad, Sheeba; Chandra, Ashish; Spicer, James; Mahadeva, Ula; Green, Anna; Stewart, Ruby; Iredale, Lara-Rose; Mackay, Tina; Deakin, Ben; Enting, Debra; Rudman, Sarah; Ghosh, Sharmistha; Karapagniotou, Lena; Pintus, Elias; Tutt, Andrew; Howlett, Sarah; Michalarea, Vasiliki; Brenton, James; Caldas, Carlos; Fitzgerald, Rebecca; Jimenez-Linan, Merche; Provenzano, Elena; Cluroe, Alison; Paterson, Anna; Aitken, Sarah; Allinson, Kieren; Stewart, Grant; Mcdermott, Ultan; Beddowes, Emma; Maughan, Tim; Ansorge, Olaf; Campbell, Peter; Roxburgh, Patricia; Fraser, Sioban; Kidd, Andrew; Blyth, Kevin; Le Quesne, John; Krebs, Matthew; Blackhall, Fiona; Summers, Yvonne; Oliveira, Pedro; Ortega-Franco, Ana; Dive, Caroline; Gomes, Fabio; Carter, Mat; Dransfield, Jo; Thomas, Anne; Fennell, Dean; Shaw, Jacqui; Naidu, Babu; Baijal, Shobhit; Tanchel, Bruce; Langman, Gerald; Robinson, Andrew; Collard, Martin; Cockcroft, Peter; Ferris, Charlotte; Bancroft, Hollie; Kerr, Amy; Middleton, Gary; Webb, Joanne; Kadiri, Salma; Colloby, Peter; Olisemeke, Bernard; Wilson, Rodelaine; Tomlinson, Ian; Mcneish, Iain; Jogai, Sanjay; Holden, Samantha; Fernandes, Tania; Hampton, Blanche; Mckenzie, Mairead; Hackshaw, Allan; Sharp, Abby; Chan, Kitty; Farrelly, Laura; Bridger, Hayley; Leslie, Rachel; Jamal-Hanjani, Mariam; Swanton, Charles; Rubin, Mark A; Wyatt, Alexander W; Beltran, Himisha; Attard, Gerhardt; Demichelis, Francesca; Null, Null
Allele-specific expression analysis in cancer using next-generation sequencing data
2019-01-01 Romanel, A.
Analysis of Genetic Ancestry from NGS Data Using EthSEQ
2023-01-01 Dalfovo, Davide; Romanel, Alessandro
Analysis of germline-driven ancestry-associated gene expression in cancers
2022-01-01 Chambwe, Nyasha; Sayaman, Rosalyn W.; Hu, Donglei; Huntsman, Scott; Kemal, Anab; Caesar-Johnson, Samantha; Zenklusen, Jean C.; Ziv, Elad; Beroukhim, Rameen; Cherniack, Andrew D.; Carrot-Zhang, Jian; Berger, Ashton C.; Han, Seunghun; Meyerson, Matthew; Damrauer, Jeffrey S.; Hoadley, Katherine A.; Felau, Ina; Demchok, John A.; Mensah, Michael K. A.; Tarnuzzer, Roy; Wang, Zhining; Yang, Liming; Knijnenburg, Theo A.; Robertson, A. Gordon; Yau, Christina; Benz, Christopher; Huang, Kuan-lin; Newberg, Justin Y.; Frampton, Garrett M.; Mashl, R. Jay; Ding, Li; Romanel, Alessandro; Demichelis, Francesca; Zhou, Wanding; Laird, Peter W.; Shen, Hui; Wong, Christopher K.; Stuart, Joshua M.; Lazar, Alexander J.; Le, Xiuning; Oak, Ninad
Analytical protocol to identify local ancestry-associated molecular features in cancer
2021-01-01 Carrot-Zhang, Jian; Han, Seunghun; Zhou, Wanding; Damrauer, Jeffrey S; Kemal, Anab; Berger, Ashton C; Meyerson, Matthew; Hoadley, Katherine A; Felau, Ina; Caesar-Johnson, Samantha; Demchok, John A; Mensah, Michael Ka; Tarnuzzer, Roy; Wang, Zhining; Yang, Liming; Zenklusen, Jean C; Chambwe, Nyasha; Knijnenburg, Theo A; Robertson, A Gordon; Yau, Christina; Benz, Christopher; Huang, Kuan-Lin; Newberg, Justin; Frampton, Garret; Mashl, R Jay; Ding, Li; Romanel, Alessandro; Demichelis, Francesca; Sayaman, Rosalyn W; Ziv, Elad; Laird, Peter W; Shen, Hui; Wong, Christopher K; Stuart, Joshua M; Lazar, Alexander J; Le, Xiuning; Oak, Ninad; Cherniack, Andrew D; Beroukhim, Rameen
Ancestry-specific predisposing germline variants in cancer
2020-01-01 Oak, Ninad; Cherniack, Andrew D.; Mashl, R. Jay; Carrot-Zhang, Jian; Chambwe, Nyasha; Damrauer, Jeffrey; Knijnenburg, Theo; Robertson, A. Gordon; Yau, Christina; Zhou, Wanding; Berger, Ashton; Huang, Kuan-lin; Mashl, R. Jay; Newberg, Justin; Romanel, Alessandro; Sayaman, Rosalyn; Demichelis, Francesca; Felau, Ina; Frampton, Garret; Han, Seunghun; Hoadley, Katherine; Kemal, Anab; Laird, Peter; Lazar, Alexander; Le, Xiuning; Oak, Ninad; Shen, Hui; Wong, Christopher; Zenklusen, Jean; Ziv, Elad; Aguet, Francois; Ding, Li; Demchok, John; Mensah, Michael; Tarnuzzer, Roy; Wang, Zhining; Yang, Liming; Alfoldi, Jessica; Karczewski, Konrad; Macarthur, Daniel; Frampton, Garret; Benz, Christopher; Stuart, Joshua; Hirsch, Fred R.; Ding, Li; Beroukhim, Rameen; Gümüş, Zeynep H.; Plon, Sharon E.; Huang, Kuan-lin
Androgen receptor gene status in plasma DNA associates with worse outcome on enzalutamide or abiraterone for castration-resistant prostate cancer: a multi-institution correlative biomarker study
2017-01-01 Conteduca, V; Wetterskog, D; Sharabiani, M. T. A; Grande, Elisabetta; Fernandez Perez, M. P; Jayaram, A; Salvi, S; Castellano, D; Romanel, Alessandro; Lolli, C; Casadio, V; Gurioli, G; Amadori, D; Font, A; Vazquez Estevez, S; González Del Alba, A; Mellado, B; Fernandez Calvo, O; Méndez Vidal, M. J; Climent, M. A; Duran, I; Gallardo, E; Rodriguez, A; Santander, C; Sáez, M. I; Puente, J; Gasi Tandefelt, D; Wingate, A; Dearnaley, D; Demichelis, Francesca; De Giorgi, U; Gonzalez Billalabeitia, E; Attard, G.
ASEQ: Fast allele-specific studies from next-generation sequencing data
2015-01-01 Romanel, Alessandro; Lago, Sara; Prandi, Davide; Sboner, Andrea; Demichelis, Francesca
Beta-binders with Static Compartments
2006-01-01 Guerriero, Maria Luisa; Romanel, Alessandro; Priami, Corrado
BetaWB: modelling and simulating biological processes
2007-01-01 Demattè, Lorenzo; Priami, Corrado; Romanel, Alessandro
BlenX Static and Dynamic Semantics
2009-01-01 Priami, Corrado; Quaglia, Paola; Romanel, Alessandro
Calcium cytotoxicity sensitizes prostate cancer cells to standard-of-care treatments for locally advanced tumors
2020-01-01 Alaimo, A.; Lorenzoni, M.; Ambrosino, P.; Bertossi, A.; Bisio, A.; Macchia, A.; Zoni, E.; Genovesi, S.; Cambuli, F.; Foletto, V.; De Felice, D.; Soldovieri, M. V.; Mosca, I.; Gandolfi, F.; Brunelli, M.; Petris, G.; Cereseto, A.; Villarroel, A.; Thalmann, G.; Carbone, F. G.; Kruithof-de Julio, M.; Barbareschi, M.; Romanel, A.; Taglialatela, M.; Lunardi, A.
Circulating tumor DNA profile recognizes transformation to castration-resistant neuroendocrine prostate cancer
2020-01-01 Beltran, H.; Romanel, A.; Conteduca, V.; Casiraghi, N.; Sigouros, M.; Franceschini, G. M.; Orlando, F.; Fedrizzi, T.; Ku, S. -Y.; Dann, E.; Alonso, A.; Mosquera, J. M.; Sboner, A.; Xiang, J.; Elemento, O.; Nanus, D. M.; Tagawa, S. T.; Benelli, M.; Demichelis, F.
Comprehensive Analysis of Genetic Ancestry and Its Molecular Correlates in Cancer
2020-01-01 Carrot-Zhang, Jian; Chambwe, Nyasha; Damrauer, Jeffrey S.; Knijnenburg, Theo A.; Robertson, A. Gordon; Yau, Christina; Zhou, Wanding; Berger, Ashton C.; Huang, Kuan-Iin; Newberg, Justin Y.; Mashl, R. Jay; Romanel, Alessandro; Sayaman, Rosalyn W.; Demichelis, Francesca; Felau, Ina; Frampton, Garrett M.; Han, Seunghun; Hoadley, Katherine A.; Kemal, Anab; Laird, Peter W.; Lazar, Alexander J.; Le, Xiuning; Oak, Ninad; Shen, Hui; Wong, Christopher K.; Zenklusen, Jean C.; Ziv, Elad; Cancer Genome Atlas Analysis, Network; Cherniack, Andrew D.; Beroukhim, Rameen