In this study, we address the challenge of analyzing electrophysiological measurements in neuronal networks. Our computational model, based on the Reservoir Computing Network (RCN) architecture, deciphers spatio-temporal data obtained from electrophysiological measurements of neuronal cultures. By reconstructing the network structure on a macroscopic scale, we reveal the connectivity between neuronal units. Notably, our model outperforms common methods such as Cross-Correlation, Transfer-Entropy, and a recently developed related algorithm in predicting the network's connectivity map. Furthermore, we experimentally validate its ability to forecast network responses to specific inputs, including localized optogenetic stimuli.
Decoding neuronal networks: A Reservoir Computing approach for predicting connectivity and functionality / Auslender, Ilya; Letti, Giorgio; Heydari, Yasaman; Zaccaria, Clara; Pavesi, Lorenzo. - In: NEURAL NETWORKS. - ISSN 0893-6080. - 184:(2025). [10.1016/j.neunet.2024.107058]
Decoding neuronal networks: A Reservoir Computing approach for predicting connectivity and functionality
Ilya Auslender
;Yasaman Heydari;Clara Zaccaria;Lorenzo Pavesi
2025-01-01
Abstract
In this study, we address the challenge of analyzing electrophysiological measurements in neuronal networks. Our computational model, based on the Reservoir Computing Network (RCN) architecture, deciphers spatio-temporal data obtained from electrophysiological measurements of neuronal cultures. By reconstructing the network structure on a macroscopic scale, we reveal the connectivity between neuronal units. Notably, our model outperforms common methods such as Cross-Correlation, Transfer-Entropy, and a recently developed related algorithm in predicting the network's connectivity map. Furthermore, we experimentally validate its ability to forecast network responses to specific inputs, including localized optogenetic stimuli.| File | Dimensione | Formato | |
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