In this paper, we present an efficient tree-based formulation for exact stochastic simulation algorithm (SSA) to improve the search for the next reaction firing. There are two implementations considered: one based on a complete binary tree and one based on the Huffman tree, an optimal tree for data compression.
Tree-Based Search for stochastic simulation algorithm
Zunino, Roberto
2012-01-01
Abstract
In this paper, we present an efficient tree-based formulation for exact stochastic simulation algorithm (SSA) to improve the search for the next reaction firing. There are two implementations considered: one based on a complete binary tree and one based on the Huffman tree, an optimal tree for data compression.File in questo prodotto:
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